Epipy Python tools for epidemiology
Epipy is a Python package for epidemiology. It contains tools for analyzing and visualizing epidemiology data.
Install using pip:
pip install epipy
or clone the github repository and install using setup.py:
git clone https://github.com/cmrivers/epipy.git python setup.py install
Note that I use the package seaborn to produce the nice plot aesthetics you see in my examples. Using seaborn is optional, but I highly recommend it.
- Summary statistics
- 2x2 table
- Odds ratio
- Relative risk
- Attributable risk
- Chi square
- Diagnostic accuracy
- Cluster + case tree analysis